

1.
Introduction
While over 1 111 700 men are diagnosed with prostate
cancer (PCa) each year worldwide, a much smaller number
(307 500) eventually die from this disease
[1] .Understand-
ing the inherited factors contributing to the progression of
PCa to a lethal disease could have an important translational
impact on the detection, diagnosis, and prognosis of this
common cancer. Specifically, a currently unmet clinical
need is to be able to predict which men are more likely to
develop a lethal PCa versus an indolent one.
The past 10 yr have seen substantial progress in
elucidating molecular factors affecting PCa susceptibility
with the identification of over 100 common genetic variants
associated with an increased risk of PCa
[2]. Although these
factors provide robust markers of PCa risk overall, they are
limited in distinguishing the risk for lethal versus indolent
PCa
[3,4].
One gene has emerged as a potentially specific driver of
more aggressive PCa. In 1997, Sigurdsson et al
[5]described
the association of a deleterious founder mutation in
BRCA2
with aggressive PCa in Icelandic families. Subsequently,
multiple studies confirmed the link between PCa and
BRCA2
emphasizing
BRCA2
as a strong risk factor
[6–9]. Castro et al
[2_TD$DIFF]
and others have described and characterized
BRCA2
as an
important prognostic factor for aggressive PCa
[10–19] ;however, the mutation frequency was low and most
estimates suggested that
BRCA2
accounted for a very small
fraction of PCa (1–2%), even when early-onset family
history-positive cases were examined
[20–23]. In a seminal
paper, Robinson et al
[24]identified mutations in three DNA
repair genes,
BRCA1/2
, and
ATM
, at a surprisingly high rate in
men unselected for age at diagnosis or family history, but
rather for aggressive disease.
More recently, Pritchard et al
[25]demonstrated an
elevated rate of mutations in a number of DNA repair genes
in men with metastatic PCa. Importantly, the combined
frequency of pathogenic mutations in a set of genes
including
BRCA1/2
and
ATM
was higher than that reported
in either the Exome Aggregation Consortium database of
53 000 unselected individuals or in the Cancer Genome
Atlas database of men with clinically localized PCa.
However, mixed racial populations and different sequenc-
ing technologies among study populations emphasize the
need for confirmation of these findings.
In this study, we directly compared germline pathogenic
mutations in
BRCA1/2
and
ATM
among lethal and indolent
(low risk localized) PCa patients from three racial groups
and assessed the effect mutational status on age at death in
a large case-case PCa cohort.
2.
Patients and methods
2.1.
Study participants
This is a retrospective case-case study including 313 independent
patients with lethal PCa and 486 independent patients with low risk
localized PCa of European American, African American, and Chinese
ancestry. Study participants were ascertained from patients undergoing
PCa treatment in both the Brady Urological Institute and the Sidney
Kimmel Comprehensive Cancer Center of the Johns Hopkins Medical
Center, Baltimore, MD, USA (Hopkins), patients undergoing active
surveillance at the John and Carol Walter Center for Urological Health,
NorthShore University HealthSystem (NorthShore), as well as patients
treated for PCa in the Department Huashan Hospital, Fudan University,
Shanghai, China (Huashan). Lethal PCa in this study was defined as death
due to metastatic PCa (obtained by death certificates and review of the
patients’ medical records). Localized PCa were patients diagnosed with
low-risk disease, including PCa patients undergoing radical surgery with
pathological findings consistent with low-risk (pathological Gleason
score 6, organ confined; Hopkins), PCa patients underwent active
surveillance (NorthShore), and PCa patients met criteria of active
surveillance (Huashan).
Clinical and demographic information of these patients, including
age, race, prostate-specific antigen (PSA), Gleason score at time of PCa
diagnosis, and years from diagnosis to death are summarized in
Table 1. The Institutional Review Board at Johns Hopkins Medical
Center, NorthShore University HealthSystem, and Huashan Hospital
approved this study and when required, written informed consent was
obtained from all study participants.
2.2.
Sequencing of germline DNA
Whole-exome sequencing (WES) was performed on germline DNA
derived from the blood of 129 lethal PCa patients at the PerkinElmer
Next-generation Sequencing Service Laboratory. The Agilent SureSelect
Human All Exon V5 was used to capture and enrich exome. Enriched
libraries were sequenced using an Illumina HiSeq 2500 system. The
mean sequencing depth of coverage was 71 . In addition, a customized
next-generation sequencing panel targeting 222 cancer related genes
was used to sequence the germline DNA of the remaining lethal PCa
patients and all the indolent PCa patients. Probes for capturing exon
regions (including 10 flanking intronic sequence) in these genes were
after diagnosis (12.26%, 4.76%, and 0.98% in patients who died 5 yr, 6–10 yr, and
>
10 yr
after a PCa diagnosis, respectively,
p
= 0.0006). Survival analysis in the entire cohort
revealed mutation carriers remained an independent predictor of lethal PCa after adjusting
for race and age, prostate-specific antigen, and Gleason score at the time of diagnosis
(hazard ratio = 2.13, 95% confidence interval: 1.24–3.66,
p
= 0.004). A limitation of this
study is that other DNA repair genes were not analyzed.
Conclusions:
Mutation status of
BRCA1/2
and
ATM
distinguishes risk for lethal and indolent
PCa and is associated with earlier age at death and shorter survival time.
Patient summary:
Prostate cancer patients with inherited mutations in
BRCA1/2
and
ATM
are more likely to die of prostate cancer and do so at an earlier age.
#
2016 European Association of Urology. Published by Elsevier B.V. All rights reserved.
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